Here is my work in progress. Any suggestions on /a/? Is it legible?

The single-story seems to gel with the rest of the logo better, as it is more open and geometric, but my vote is for the double-story since it will not be confused with an o at smaller sizes. The double-story a is a little heavier visually than the rest of the lettering, but only slightly. You asked if it looks small, but I don't see that at all, so I think you're ok there. For what it's worth, the thinner weight of the two looks much better to me, more natural.
For fun, here's the a both ways:
http://www.myfonts.com/fonts/gtandcanary/morebi-rounded/
http://www.myfonts.com/fonts/canadatype/vox/
@_Brian
Thanks, exactly what I think about the /a/. I thought it could read as /o/.
About the size of double-story /a/, you described the problem better, that's what I'm talking about. Single-story blends much better with the rest of the letters.
Those fonts you linked are great by the way. I'll study them.
Captured from web.archive.org on 19 Apr 2015. view this capture